.. SPDX-FileCopyrightText: 2021-2024 Helmholtz-Zentrum hereon GmbH .. .. SPDX-License-Identifier: CC-BY-4.0 .. _install: .. highlight:: bash Installation ============ How to install -------------- There basically three different methodologies for the installation. You should choose the one, which is the most appropriate solution concerning your skills and your usage: The recommended installation We recommend to use anaconda for installing python and psyplot (see :ref:`install-conda`). If you however already have python installed on your system, you can also use pip (see :ref:`install-pip`). The developer installation Install it from source (see :ref:`install-source`) .. _install-conda: Installation using conda ^^^^^^^^^^^^^^^^^^^^^^^^ We highly recommend to use conda_ for installing psyplot. After having downloaded the `miniconda installer`_, you can install psyplot and the optional plugins (see :ref:`optional_deps`) via:: $ conda install -c conda-forge psy-view psy-reg If you only want to install the core, i.e. the raw framework, run:: $ conda install -c conda-forge psyplot If you want to be able to read GeoTiff Raster files, you will need to have gdal_ installed:: $ conda install gdal Please also visit the `xarray installation notes`_ for more informations on how to best configure the `xarray`_ package for your needs. .. _install-pip: Installation using pip ^^^^^^^^^^^^^^^^^^^^^^ If you do not want to use conda for managing your python packages, you can also use the python package manager ``pip`` and install via:: $ pip install psyplot However to be on the safe side, make sure you have the :ref:`dependencies` installed. .. _install-source: Installation from source ^^^^^^^^^^^^^^^^^^^^^^^^ To install it from source, make sure you have the :ref:`dependencies` installed, clone the github_ repository via:: git clone https://codebase.helmholtz.cloud/psyplot/psyplot.git and install it via:: python setup.py install .. _dependencies: Dependencies ------------ Required dependencies ^^^^^^^^^^^^^^^^^^^^^ Psyplot supports officially python 3.6 and 3.7. Previous versions are also available for python 2.7. Furthermore the package is built upon multiple other packages, mainly - xarray_>=0.8: Is used for the data management in the psyplot package - matplotlib_>=1.4.3<3.1: **The** python visualiation package - `PyYAML `__: Needed for the configuration of psyplot - docrep_: A package for efficient documentation processing for large APIs - funcargparse_: A package to create command line parsers from function docstrings .. _optional_deps: Optional dependencies ^^^^^^^^^^^^^^^^^^^^^ We furthermore recommend to use - :ref:`psyplot-gui `: A graphical user interface to psyplot - :ref:`psy-view `: An ncview-like interface based on psyplot and psy-maps - :ref:`psy-simple `: A psyplot plugin to make simple plots - :ref:`psy-maps `: A psyplot plugin for visualizing data on a map - :ref:`psy-reg `: A psyplot plugin for visualizing fits to your data .. _netCDF4: https://github.com/Unidata/netcdf4-python .. _gdal: http://www.gdal.org/ .. _conda: https://conda.io/docs/ .. _miniconda installer: https://conda.io/en/latest/miniconda.html .. _matplotlib: http://matplotlib.org .. _docrep: https://docrep.readthedocs.io .. _funcargparse: https://funcargparse.readthedocs.io .. _xarray installation notes: http://xarray.pydata.org/en/stable/installing.html .. _xarray: http://xarray.pydata.org/ Running the tests ----------------- We us pytest_ to run our tests. So you can either run clone out the github_ repository and run:: $ python setup.py test or install pytest_ by yourself and run:: $ py.test To also test the plugin functionality, install the ``psyplot_test`` module in ``tests/test_plugin`` via:: $ cd tests/test_plugin && python setup.py install and run the tests via one of the above mentioned commands. Building the docs ----------------- To build the docs, check out the github_ repository and install the requirements in ``'docs/environment.yml'``. The easiest way to do this is via anaconda by typing:: $ conda env create -f docs/environment.yml $ source activate psyplot_docs Then build the docs via:: $ cd docs $ make html .. note:: The building of the docs always preprocesses the examples. You might want to disable that by setting ``process_examples = False``. Otherwise please note that the examples are written as python3 notebooks, hence you may have to install a python3 kernel through ipykernel_. Just create a new environment ``'py37'`` and install it via:: conda create -n py37 python=3.7 source activate py37 conda install notebook ipykernel ipython kernel install --user You then have to install the necessary modules for each of the examples in the new ``'py37'`` environment. .. _github: https://codebase.helmholtz.cloud/psyplot/psyplot .. _ipykernel: https://ipykernel.readthedocs.io .. _pytest: https://pytest.org/latest/contents.html .. _uninstall: Uninstallation -------------- The uninstallation depends on the system you used to install psyplot. Either you did it via :ref:`conda ` (see :ref:`uninstall-conda`), via :ref:`pip ` or from the :ref:`source files ` (see :ref:`uninstall-pip`). Anyway, if you may want to remove the psyplot configuration files. If you did not specify anything else (see :func:`psyplot.config.rcsetup.psyplot_fname`), the configuration files for psyplot are located in the user home directory. Under linux and OSX, this is ``$HOME/.config/psyplot``. On other platforms it is in the ``.psyplot`` directory in the user home. .. _uninstall-conda: Uninstallation via conda ^^^^^^^^^^^^^^^^^^^^^^^^ If you installed psyplot via :ref:`conda `, simply run:: conda remove psyplot or, if you installed it into an own conda environment, remove the environment via:: conda env remove -n .. _uninstall-pip: Uninstallation via pip ^^^^^^^^^^^^^^^^^^^^^^ Uninstalling via pip simply goes via:: pip uninstall psyplot Note, however, that you should use :ref:`conda ` if you also installed it via conda.